Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose 1,6-bisphosphatase | ABT58_20810 | Not Available | Negative | 4761921 - 4762931 | 37156.2 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | ABT58_20815 | Not Available | Positive | 4763142 - 4764506 | 49299.9 |
| aromatic acid decarboxylase | ABT58_20820 | Not Available | Positive | 4764523 - 4765140 | 22082.0 |
| universal stress protein | ABT58_20825 | Not Available | Negative | 4765243 - 4765704 | 17051.5 |
| c4-dicarboxylate abc transporter | ABT58_20830 | Not Available | Negative | 4765889 - 4768465 | 92535.8 |
| c4-dicarboxylate abc transporter substrate-binding protein | ABT58_20835 | Not Available | Negative | 4768574 - 4769542 | 34578.1 |
| arginine repressor | ABT58_20840 | Not Available | Negative | 4769875 - 4770345 | 17006.6 |
| malate dehydrogenase | ABT58_20845 | Not Available | Positive | 4770714 - 4771652 | 32342.2 |
| malate dehydrogenase | ABT58_20850 | Not Available | Negative | 4771771 - 4771962 | 7439.6 |
| octaprenyl diphosphate synthase | ABT58_20855 | Not Available | Negative | 4772207 - 4773178 | 35008.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
