Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_5972 | Not Available | Negative | 809139 - 809468 | 12170.7 |
| glpg protein | JCM19237_5973 | Not Available | Negative | 809576 - 809857 | 10398.9 |
| rhomboid family protein | JCM19237_5974 | Not Available | Negative | 809860 - 810159 | 10809.5 |
| hypothetical protein | JCM19237_5975 | Not Available | Negative | 810244 - 810732 | 17766.3 |
| hypothetical protein | JCM19237_5976 | Not Available | Positive | 810968 - 811189 | 8253.88 |
| lipoprotein putative | JCM19237_5977 | Not Available | Positive | 811231 - 811752 | 19511.9 |
| 2-keto-3-deoxy-d-arabino-heptulosonate-7- phosphate synthase i alpha | JCM19237_5978 | Not Available | Negative | 811914 - 812138 | 8052.51 |
| 2-keto-3-deoxy-d-arabino-heptulosonate-7- phosphate synthase i alpha | JCM19237_5979 | Not Available | Negative | 812156 - 812635 | 16836.1 |
| 2-keto-3-deoxy-d-arabino-heptulosonate-7- phosphate synthase i alpha | JCM19237_5980 | Not Available | Negative | 812628 - 812912 | 10673.0 |
| amino acid abc transporter atp-binding protein | JCM19237_5981 | Not Available | Positive | 813331 - 813798 | 17179.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
