Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein h | ABT58_19925 | Not Available | Negative | 4566883 - 4567278 | 14321.1 |
| oxidoreductase | ABT58_19930 | Not Available | Negative | 4567674 - 4568882 | 44243.4 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | ABT58_19935 | Not Available | Negative | 4568885 - 4570036 | 40772.1 |
| exported protein precursor | ABT58_19940 | Not Available | Negative | 4570094 - 4570747 | 23232.3 |
| z-ring-associated protein | ABT58_19945 | Not Available | Positive | 4571029 - 4571331 | 11515.6 |
| 5-formyltetrahydrofolate cyclo-ligase | ABT58_19950 | Not Available | Positive | 4571590 - 4572201 | 23293.7 |
| ribose 5-phosphate isomerase | ABT58_19955 | Not Available | Positive | 4572477 - 4573136 | 23377.2 |
| d-3-phosphoglycerate dehydrogenase | ABT58_19960 | Not Available | Positive | 4573437 - 4574666 | 44509.4 |
| hypothetical protein | ABT58_19965 | Not Available | Negative | 4574777 - 4575475 | 25342.3 |
| mechanosensitive ion channel protein | ABT58_19970 | Not Available | Negative | 4575627 - 4576532 | 32527.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
