Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | ABT58_19825 | Not Available | Negative | 4550564 - 4551295 | 26455.6 |
| dna repair protein reco | ABT58_19830 | Not Available | Negative | 4551292 - 4552002 | 26710.6 |
| gtpase era | ABT58_19835 | Not Available | Negative | 4552012 - 4552917 | 34440.7 |
| hypothetical protein | ABT58_19840 | Not Available | Negative | 4552914 - 4553588 | 24880.9 |
| signal peptidase | ABT58_19845 | Not Available | Negative | 4553600 - 4554499 | 33289.1 |
| elongation factor 4 | ABT58_19850 | Not Available | Negative | 4554676 - 4556472 | 66303.9 |
| sigma-e factor regulatory protein | ABT58_19855 | Not Available | Negative | 4556552 - 4557049 | 17060.8 |
| sigma-e factor regulatory protein rseb | ABT58_19860 | Not Available | Negative | 4557046 - 4558020 | 36351.8 |
| anti-sigma e factor | ABT58_19865 | Not Available | Negative | 4558035 - 4558703 | 24181.4 |
| rna polymerase sigma factor rpoe | ABT58_19870 | Not Available | Negative | 4558728 - 4559306 | 21870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
