Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanyl-trna synthetase | ABT58_19725 | Not Available | Negative | 4524946 - 4527570 | 94473.0 |
| recx family transcriptional regulator | ABT58_19730 | Not Available | Negative | 4527841 - 4528323 | 18758.0 |
| recombinase a | ABT58_19735 | Not Available | Negative | 4528437 - 4529495 | 37977.7 |
| damage-inducible protein cina | ABT58_19740 | Not Available | Negative | 4529618 - 4530115 | 17293.2 |
| dna mismatch repair protein muts | ABT58_19745 | Not Available | Positive | 4530332 - 4532920 | 95543.7 |
| rna polymerase sigma factor rpos | ABT58_19750 | Not Available | Negative | 4533053 - 4534045 | 37745.8 |
| membrane protein | ABT58_19755 | Not Available | Negative | 4534102 - 4535067 | 35448.5 |
| protein-l-isoaspartate o-methyltransferase | ABT58_19760 | Not Available | Negative | 4535068 - 4535700 | 23322.2 |
| stationary phase survival protein sure | ABT58_19765 | Not Available | Negative | 4535703 - 4536452 | 26963.9 |
| pseudouridine synthase | ABT58_19770 | Not Available | Negative | 4536433 - 4537506 | 40103.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
