Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna-processing protein rimm | ABT58_19575 | Not Available | Negative | 4506111 - 4506638 | 19938.7 |
| 30s ribosomal protein s16 | ABT58_19580 | Not Available | Negative | 4506663 - 4506911 | 9118.07 |
| signal recognition particle | ABT58_19585 | Not Available | Negative | 4507096 - 4508460 | 50075.5 |
| chromosome partitioning protein parb | ABT58_19590 | Not Available | Positive | 4508674 - 4509471 | 29194.2 |
| hypothetical protein | ABT58_19595 | Not Available | Positive | 4509564 - 4510841 | 47212.7 |
| s-ribosylhomocysteinase | ABT58_19600 | Not Available | Negative | 4510894 - 4511412 | 19018.8 |
| hypothetical protein | ABT58_19605 | Not Available | Negative | 4511565 - 4512191 | 24260.5 |
| glutamate--cysteine ligase | ABT58_19610 | Not Available | Negative | 4512328 - 4513932 | 59848.3 |
| peptidase m16 | ABT58_19615 | Not Available | Negative | 4514152 - 4517016 | 104948.0 |
| membrane protein | ABT58_19620 | Not Available | Negative | 4517028 - 4517459 | 15655.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
