Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coagulation factor ix | JCM19237_5942 | Not Available | Positive | 786053 - 786451 | 14106.3 |
| hypothetical protein | JCM19237_5943 | Not Available | Positive | 786438 - 786626 | 6030.88 |
| rnd efflux system inner membrane transporter cmeb | JCM19237_5944 | Not Available | Negative | 786779 - 789931 | 113737.0 |
| rnd efflux system membrane fusion protein cmea | JCM19237_5945 | Not Available | Negative | 789934 - 790965 | 37189.0 |
| hypothetical protein | JCM19237_5946 | Not Available | Positive | 791111 - 791224 | 4116.94 |
| siroheme synthase | JCM19237_5947 | Not Available | Positive | 791363 - 791926 | 20962.3 |
| siroheme synthase | JCM19237_5948 | Not Available | Positive | 791941 - 792300 | 13624.3 |
| multiple antibiotic resistance protein marc | JCM19237_5949 | Not Available | Positive | 792665 - 793327 | 23171.6 |
| putative plasmid-related protein | JCM19237_5950 | Not Available | Positive | 793543 - 793986 | 16303.3 |
| putative plasmid-related protein | JCM19237_5951 | Not Available | Positive | 793965 - 794345 | 14496.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
