Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | ABT58_18375 | Not Available | Positive | 4208090 - 4208935 | 31358.6 |
| membrane protein | ABT58_18380 | Not Available | Negative | 4208922 - 4209611 | 25587.4 |
| murein transglycosylase | ABT58_18385 | Not Available | Negative | 4209608 - 4211185 | 58612.5 |
| hydroxyacylglutathione hydrolase | ABT58_18390 | Not Available | Negative | 4211256 - 4212014 | 28113.3 |
| sam-dependent methyltransferase | ABT58_18395 | Not Available | Positive | 4212068 - 4212811 | 28283.6 |
| ribonuclease h | ABT58_18400 | Not Available | Negative | 4212869 - 4213333 | 17578.7 |
| dna polymerase iii subunit epsilon | ABT58_18405 | Not Available | Positive | 4213386 - 4214114 | 27087.4 |
| glutamate synthase | ABT58_18410 | Not Available | Positive | 4214122 - 4215363 | 46820.2 |
| acyl-coa dehydrogenase | ABT58_18415 | Not Available | Negative | 4215476 - 4217938 | 89977.8 |
| transporter | ABT58_18420 | Not Available | Positive | 4218485 - 4220161 | 58862.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
