Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | ABT58_18070 | Not Available | Negative | 4134075 - 4135271 | 42448.5 |
| cdp-diglyceride synthetase | ABT58_18075 | Not Available | Negative | 4135391 - 4136239 | 30384.1 |
| udp pyrophosphate synthase | ABT58_18080 | Not Available | Negative | 4136391 - 4137152 | 28141.7 |
| ribosome recycling factor | ABT58_18085 | Not Available | Negative | 4137234 - 4137791 | 20849.3 |
| uridylate kinase | ABT58_18090 | Not Available | Negative | 4137871 - 4138596 | 26087.7 |
| elongation factor ts | ABT58_18095 | Not Available | Negative | 4138687 - 4139532 | 29975.1 |
| 30s ribosomal protein s2 | ABT58_18100 | Not Available | Negative | 4139646 - 4140374 | 26955.4 |
| methionine aminopeptidase | ABT58_18105 | Not Available | Positive | 4140677 - 4141552 | 32267.6 |
| protein-pii uridylyltransferase | ABT58_18110 | Not Available | Positive | 4141680 - 4144343 | 101696.0 |
| flavodoxin | ABT58_18115 | Not Available | Negative | 4144485 - 4144943 | 16495.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
