Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | ABT58_17965 | Not Available | Negative | 4111321 - 4111446 | 4844.13 |
| 50s ribosomal protein l31 | ABT58_17970 | Not Available | Negative | 4111443 - 4111712 | 10323.0 |
| trna (adenine(37)-n6)-methyltransferase | ABT58_17975 | Not Available | Positive | 4111889 - 4112578 | 25402.3 |
| proline--trna ligase | ABT58_17980 | Not Available | Positive | 4112753 - 4114468 | 63180.9 |
| patatin | ABT58_17985 | Not Available | Positive | 4114560 - 4115726 | 42791.3 |
| diguanylate cyclase | ABT58_17990 | Not Available | Positive | 4115803 - 4116660 | 33009.7 |
| hypothetical protein | ABT58_17995 | Not Available | Positive | 4116803 - 4117009 | 7506.96 |
| hypothetical protein | ABT58_18000 | Not Available | Positive | 4117009 - 4117197 | 7136.69 |
| tnab | ABT58_18005 | Not Available | Negative | 4117321 - 4118532 | 42375.3 |
| cytochrome c biogenesis protein ccsb | ABT58_18010 | Not Available | Negative | 4118766 - 4119077 | 11064.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
