Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular matrix protein pelf glycosyltransferase group 1 | JCM19237_5922 | Not Available | Positive | 768493 - 770031 | 57491.1 |
| extracellular matrix protein pelg | JCM19237_5923 | Not Available | Positive | 770086 - 770847 | 28471.1 |
| extracellular matrix protein pelg | JCM19237_5924 | Not Available | Positive | 770853 - 771383 | 19817.9 |
| putative stomatin/prohibitin-family membrane protease subunit aq_911 | JCM19237_5925 | Not Available | Negative | 771507 - 772373 | 32027.7 |
| putative membrane-bound clpp-class protease | JCM19237_5926 | Not Available | Negative | 772492 - 773967 | 51902.1 |
| hypothetical protein | JCM19237_5927 | Not Available | Negative | 774044 - 774157 | 4204.42 |
| glutamate receptor 1 precursor | JCM19237_5928 | Not Available | Positive | 774590 - 775675 | 40203.4 |
| hypothetical protein | JCM19237_5929 | Not Available | Negative | 776600 - 777496 | 34234.3 |
| inner membrane protein | JCM19237_5930 | Not Available | Negative | 777472 - 778047 | 22391.8 |
| putative regulator protein | JCM19237_5931 | Not Available | Negative | 778063 - 778662 | 23079.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
