Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | ABT58_17290 | Not Available | Negative | 3947669 - 3948226 | 20191.5 |
| dtw domain protein | ABT58_17295 | Not Available | Positive | 3948237 - 3948896 | 24191.0 |
| deoxyguanosinetriphosphate triphosphohydrolase | ABT58_17300 | Not Available | Negative | 3949075 - 3950451 | 52047.6 |
| hypothetical protein | ABT58_17305 | Not Available | Negative | 3950451 - 3951035 | 22151.5 |
| aminotransferase | ABT58_17310 | Not Available | Negative | 3951206 - 3952420 | 45362.9 |
| isochorismate synthase | ABT58_17315 | Not Available | Positive | 3952993 - 3954309 | 48941.0 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | ABT58_17320 | Not Available | Positive | 3954306 - 3956045 | 62465.8 |
| hypothetical protein | ABT58_17325 | Not Available | Positive | 3956029 - 3956985 | 34383.7 |
| o-succinylbenzoate synthase | ABT58_17330 | Not Available | Positive | 3957016 - 3957990 | 35354.5 |
| o-succinylbenzoic acid--coa ligase | ABT58_17335 | Not Available | Positive | 3957994 - 3959427 | 52267.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
