Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug and toxin extrusion (mate) family efflux pump ydhe/norm homolog | JCM19237_5902 | Not Available | Negative | 751656 - 752642 | 35247.4 |
| multidrug and toxin extrusion (mate) family efflux pump ydhe/norm homolog | JCM19237_5903 | Not Available | Negative | 752651 - 753046 | 13674.2 |
| glycine cleavage system transcriptional activator | JCM19237_5904 | Not Available | Positive | 753200 - 754159 | 37368.5 |
| electron transfer flavoprotein alpha subunit | JCM19237_5905 | Not Available | Negative | 754176 - 754433 | 8766.55 |
| electron transfer flavoprotein alpha subunit | JCM19237_5906 | Not Available | Negative | 754486 - 755160 | 23906.5 |
| electron transfer flavoprotein beta subunit | JCM19237_5907 | Not Available | Negative | 755160 - 755534 | 13672.7 |
| electron transfer flavoprotein beta subunit | JCM19237_5908 | Not Available | Negative | 755519 - 755854 | 11726.5 |
| electron transfer flavoprotein beta subunit | JCM19237_5909 | Not Available | Negative | 755862 - 755975 | 4280.42 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | JCM19237_5910 | Not Available | Positive | 756075 - 757733 | 60798.9 |
| ribosomal rna large subunit methyltransferase f | JCM19237_5911 | Not Available | Negative | 757867 - 758919 | 38620.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
