Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 3629533 - 3629608 | Not Available |
| epoxyqueuosine reductase | ABT58_15840 | Not Available | Negative | 3630451 - 3631584 | 42590.1 |
| nad(p)h-hydrate epimerase | ABT58_15845 | Not Available | Positive | 3631958 - 3633538 | 54717.5 |
| atpase | ABT58_15850 | Not Available | Positive | 3633547 - 3634011 | 17413.6 |
| n-acetylmuramoyl-l-alanine amidase | ABT58_15855 | Not Available | Positive | 3634016 - 3635743 | 62738.5 |
| dna mismatch repair protein mutl | ABT58_15860 | Not Available | Positive | 3635747 - 3638053 | 83168.3 |
| trna dimethylallyltransferase | ABT58_15865 | Not Available | Positive | 3638046 - 3638981 | 34741.9 |
| rna-binding protein hfq | ABT58_15870 | Not Available | Positive | 3639067 - 3639336 | 10064.1 |
| gtpase hflx | ABT58_15875 | Not Available | Positive | 3639363 - 3640652 | 48393.9 |
| membrane protease hflk | ABT58_15880 | Not Available | Positive | 3640709 - 3641863 | 42240.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
