Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose efflux permease | JCM19237_5872 | Not Available | Positive | 728016 - 728255 | 8639.61 |
| arabinose efflux permease | JCM19237_5873 | Not Available | Positive | 728252 - 728524 | 9952.46 |
| protein acetyltransferase | JCM19237_5874 | Not Available | Positive | 728763 - 729170 | 14268.5 |
| protein acetyltransferase | JCM19237_5875 | Not Available | Positive | 729256 - 730314 | 38519.2 |
| protein acetyltransferase | JCM19237_5876 | Not Available | Positive | 730283 - 731455 | 43197.7 |
| hypothetical protein | JCM19237_5877 | Not Available | Positive | 731615 - 731905 | 10851.0 |
| hypothetical protein | JCM19237_5878 | Not Available | Negative | 731969 - 732100 | 5105.32 |
| transcriptional regulator lysr family | JCM19237_5879 | Not Available | Negative | 733061 - 733951 | 32607.6 |
| hypothetical protein | JCM19237_5880 | Not Available | Positive | 734403 - 734759 | 13003.5 |
| hypothetical protein | JCM19237_5881 | Not Available | Positive | 735139 - 735252 | 4310.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
