Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_4973 | Not Available | Positive | 15618 - 15863 | 8774.48 |
| hypothetical protein | JCM19237_4974 | Not Available | Positive | 15968 - 16180 | 8012.42 |
| 4-amino-4-deoxy-l-arabinose transferase | JCM19237_4975 | Not Available | Positive | 16211 - 16561 | 13334.8 |
| hypothetical protein | JCM19237_4976 | Not Available | Positive | 16659 - 16976 | 11950.6 |
| choline-glycine betaine transporter | JCM19237_4977 | Not Available | Negative | 17043 - 18941 | 70291.3 |
| abc transporter periplasmic spermidine putrescine-binding protein potd | JCM19237_4978 | Not Available | Positive | 19248 - 20270 | 37912.1 |
| deacetylases | JCM19237_4979 | Not Available | Positive | 20271 - 21323 | 39131.0 |
| lactoylglutathione lyase | JCM19237_4980 | Not Available | Positive | 21530 - 22015 | 18751.4 |
| hypothetical protein | JCM19237_4981 | Not Available | Negative | 23079 - 23258 | 6810.63 |
| modification methylase ngofvii | JCM19237_4982 | Not Available | Positive | 23334 - 23552 | 8713.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
