Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation and cell division repeat protein | HMPREF9554_00727 | Not Available | Negative | 653625 - 655193 | 58318.3 |
| hypothetical protein | HMPREF9554_00728 | Not Available | Negative | 655205 - 655711 | 18646.3 |
| diguanylate cyclase (ggdef) domain protein | HMPREF9554_00729 | P0AAP2 | Negative | 655866 - 656840 | 36693.3 |
| diguanylate cyclase (ggdef) domain protein | HMPREF9554_00730 | P54595 | Negative | 656837 - 657811 | 35991.7 |
| hypothetical protein | HMPREF9554_00731 | Not Available | Positive | 658078 - 658611 | 19667.1 |
| hypothetical protein | HMPREF9554_00732 | Not Available | Positive | 658721 - 658985 | 10462.1 |
| hypothetical protein | HMPREF9554_00733 | Not Available | Positive | 658985 - 659227 | 8442.38 |
| leucine rich repeat protein | HMPREF9554_00734 | Not Available | Positive | 659303 - 662413 | 113430.0 |
| hypothetical protein | HMPREF9554_00735 | Not Available | Positive | 662683 - 662856 | 6283.12 |
| dna repair protein rada | HMPREF9554_00736 | O83985 | Positive | 662886 - 664277 | 49468.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
