Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein | HMPREF9554_00357 | Not Available | Positive | 317241 - 318698 | 55755.2 |
| hypothetical protein | HMPREF9554_00358 | Not Available | Positive | 318876 - 319973 | 42271.5 |
| hypothetical protein | HMPREF9554_00359 | Not Available | Positive | 320040 - 320828 | 30512.5 |
| hypothetical protein | HMPREF9554_00360 | Not Available | Positive | 320905 - 321987 | 42582.5 |
| licd family protein | HMPREF9554_00361 | P14184 | Positive | 322020 - 322844 | 33161.0 |
| capsular polysaccharide synthesis protein | HMPREF9554_00362 | Not Available | Positive | 322844 - 323794 | 37792.4 |
| acyltransferase | HMPREF9554_00363 | P08888 | Positive | 323885 - 324931 | 40526.7 |
| glycosyltransferase, group 2 family protein | HMPREF9554_00364 | Not Available | Positive | 324928 - 325755 | 32578.0 |
| nad dependent epimerase/dehydratase family protein | HMPREF9554_00365 | Q8X7P7 | Positive | 325775 - 326764 | 37460.8 |
| glucose-1-phosphate thymidylyltransferase | HMPREF9554_00366 | P55254 | Positive | 326774 - 327649 | 32111.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
