Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9554_03152 | Not Available | Negative | 2789677 - 2789868 | 7350.99 |
| tetratricopeptide repeat protein | HMPREF9554_03151 | Not Available | Positive | 2789867 - 2790493 | 24059.6 |
| hypothetical protein | HMPREF9554_03153 | Not Available | Negative | 2790502 - 2790630 | 4454.68 |
| hypothetical protein | HMPREF9554_03154 | Not Available | Positive | 2790633 - 2790755 | 4588.49 |
| hypothetical protein | HMPREF9554_03155 | Not Available | Negative | 2790911 - 2792089 | 44035.0 |
| pseudouridine synthase, rlua family | HMPREF9554_03156 | Q9KQH0 | Positive | 2792105 - 2792791 | 25138.8 |
| hypothetical protein | HMPREF9554_03157 | Not Available | Negative | 2792925 - 2793086 | 5956.33 |
| Trna-val | Not Available | Not Available | Positive | 2793491 - 2793562 | Not Available |
| hypothetical protein | HMPREF9554_03159 | O83684 | Positive | 2793580 - 2794395 | 31662.5 |
| hypothetical protein | HMPREF9554_03160 | Not Available | Positive | 2794395 - 2794700 | 11630.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
