Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook capping protein | HMPREF9554_02861 | Not Available | Negative | 2502686 - 2503177 | 18007.3 |
| flagellar hook-length control protein | HMPREF9554_02862 | Not Available | Negative | 2503187 - 2504527 | 48894.4 |
| hypothetical protein | HMPREF9554_02863 | Not Available | Positive | 2504978 - 2505553 | 21454.0 |
| hypothetical protein | HMPREF9554_02864 | Not Available | Positive | 2505546 - 2507324 | 67964.0 |
| hypothetical protein | HMPREF9554_02865 | Not Available | Positive | 2507305 - 2507568 | 10475.8 |
| trna ligases class ii (d, k and n) | HMPREF9554_02866 | A1JIQ4 | Positive | 2507651 - 2508772 | 41898.5 |
| hypothetical protein | HMPREF9554_02867 | Not Available | Negative | 2508833 - 2509228 | 15510.5 |
| hypothetical protein | HMPREF9554_02868 | Not Available | Negative | 2509325 - 2509537 | 8420.94 |
| hypothetical protein | HMPREF9554_02869 | Not Available | Negative | 2509560 - 2509682 | 4760.76 |
| hamp domain protein | HMPREF9554_02870 | Q88D09 | Negative | 2509768 - 2511696 | 70716.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
