Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate phosphoribosyltransferase | HMPREF9554_02841 | O32090 | Negative | 2485218 - 2486648 | 53225.9 |
| hypothetical protein | HMPREF9554_02842 | Not Available | Positive | 2486792 - 2486911 | 4560.89 |
| hypothetical protein | HMPREF9554_02843 | Not Available | Positive | 2487096 - 2487761 | 23658.6 |
| hypothetical protein | HMPREF9554_02844 | Not Available | Positive | 2488041 - 2488181 | 5386.44 |
| hypothetical protein | HMPREF9554_02845 | Not Available | Negative | 2488193 - 2488324 | 4995.43 |
| cobq/cobb/mind/para nucleotide binding domain protein | HMPREF9554_02846 | G3XD64 | Negative | 2488537 - 2489418 | 32117.5 |
| srp54-type protein, gtpase domain protein | HMPREF9554_02847 | Q56339 | Negative | 2489458 - 2490777 | 50187.2 |
| flagellar biosynthesis protein flha | HMPREF9554_02848 | Q56338 | Negative | 2490787 - 2492916 | 77561.0 |
| flagellar biosynthetic protein flhb | HMPREF9554_02849 | O83710 | Negative | 2492909 - 2494048 | 42990.9 |
| flagellar biosynthetic protein flir | HMPREF9554_02850 | P74932 | Negative | 2494045 - 2494842 | 29417.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
