Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, substrate-binding protein, family 3 | HMPREF9554_02761 | Not Available | Negative | 2427660 - 2428484 | 29863.1 |
| hypothetical protein | HMPREF9554_02762 | Not Available | Negative | 2428612 - 2428731 | 4963.07 |
| hypothetical protein | HMPREF9554_02763 | Not Available | Positive | 2428801 - 2428923 | 4975.42 |
| hypothetical protein | HMPREF9554_02764 | Not Available | Positive | 2428951 - 2429082 | 5097.59 |
| hypothetical protein | HMPREF9554_02765 | Not Available | Positive | 2429099 - 2430070 | 36874.5 |
| mta/sah nucleosidase | HMPREF9554_02766 | P96122 | Negative | 2430124 - 2430957 | 29880.3 |
| mate efflux family protein | HMPREF9554_02767 | Not Available | Positive | 2431340 - 2432737 | 51162.3 |
| hypothetical protein | HMPREF9554_02768 | Not Available | Positive | 2432945 - 2433160 | 8567.66 |
| na+/h+ antiporter family protein | HMPREF9554_02769 | P44263 | Positive | 2433668 - 2435299 | 58317.5 |
| ctp synthase | HMPREF9554_02770 | Q73J84 | Positive | 2435427 - 2437034 | 60303.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
