Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioester hydrolase, ybgc/ybaw family | HMPREF9554_02481 | Not Available | Positive | 2162269 - 2162670 | 15135.1 |
| hypothetical protein | HMPREF9554_02482 | Not Available | Positive | 2162790 - 2162945 | 5944.05 |
| putative atp-dependent protease | HMPREF9554_02483 | P75867 | Positive | 2163130 - 2165553 | 90933.5 |
| hypothetical protein | HMPREF9554_02484 | Not Available | Negative | 2165591 - 2165812 | 8602.42 |
| femab family protein | HMPREF9554_02485 | Not Available | Negative | 2166066 - 2167274 | 45951.3 |
| hypothetical protein | HMPREF9554_02486 | Not Available | Negative | 2167406 - 2167936 | 21150.5 |
| hypothetical protein | HMPREF9554_02487 | Not Available | Positive | 2168061 - 2168291 | 8853.59 |
| hypothetical protein | HMPREF9554_02488 | Not Available | Positive | 2168472 - 2168669 | 6939.32 |
| hypothetical protein | HMPREF9554_02489 | Not Available | Negative | 2169002 - 2169151 | 5592.31 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme gida | HMPREF9554_02490 | O83084 | Negative | 2169371 - 2171260 | 69517.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
