Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9554_02321 | Not Available | Negative | 2036375 - 2037157 | 29964.8 |
| Trna-lys | Not Available | Not Available | Positive | 2037406 - 2037478 | Not Available |
| trypsin | HMPREF9554_02323 | O22609 | Positive | 2037663 - 2038883 | 43255.2 |
| hypothetical protein | HMPREF9554_02324 | Not Available | Positive | 2039014 - 2039193 | 7044.74 |
| hypothetical protein | HMPREF9554_02325 | Not Available | Negative | 2039339 - 2039500 | 6222.71 |
| n-acetylglucosamine-6-phosphate deacetylase | HMPREF9554_02326 | O32445 | Positive | 2039629 - 2040747 | 41266.3 |
| hypothetical protein | HMPREF9554_02327 | Not Available | Negative | 2040965 - 2041525 | 21546.3 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF9554_02328 | P54554 | Negative | 2041633 - 2042430 | 29150.6 |
| hypothetical protein | HMPREF9554_02330 | Not Available | Negative | 2042427 - 2042627 | 7954.92 |
| hypothetical protein | HMPREF9554_02329 | Not Available | Positive | 2042596 - 2042832 | 9107.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
