Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9554_02241 | Not Available | Negative | 1960787 - 1960915 | 4733.68 |
| hypothetical protein | HMPREF9554_02242 | Not Available | Positive | 1961058 - 1961339 | 10869.5 |
| hypothetical protein | HMPREF9554_02243 | Not Available | Positive | 1961373 - 1961553 | 7057.65 |
| hypothetical protein | HMPREF9554_02244 | Not Available | Positive | 1961759 - 1961911 | 5817.18 |
| abc transporter, solute-binding protein | HMPREF9554_02245 | Not Available | Negative | 1962052 - 1963314 | 48430.7 |
| hypothetical protein | HMPREF9554_02246 | Not Available | Negative | 1963348 - 1963518 | 6380.65 |
| hypothetical protein | HMPREF9554_02247 | Q9HTR2 | Positive | 1964013 - 1965299 | 47824.9 |
| methyl-accepting chemotaxis protein | HMPREF9554_02248 | Not Available | Positive | 1965508 - 1966188 | 25312.1 |
| hamp domain protein | HMPREF9554_02249 | Not Available | Positive | 1966321 - 1967556 | 44781.6 |
| hypothetical protein | HMPREF9554_02250 | Not Available | Negative | 1967622 - 1968290 | 25292.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
