Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9554_02030 | Not Available | Positive | 1778244 - 1778411 | 6489.28 |
| putative chlorohydrolase/aminohydrolase | HMPREF9554_02031 | Q8PUQ3 | Positive | 1778615 - 1780033 | 52980.5 |
| hypothetical protein | HMPREF9554_02032 | Not Available | Positive | 1780221 - 1780343 | 4710.81 |
| hypothetical protein | HMPREF9554_02033 | Not Available | Positive | 1780347 - 1780466 | 4317.5 |
| putative permease | HMPREF9554_02034 | P50487 | Positive | 1780600 - 1781976 | 47752.2 |
| selenium-dependent molybdenum hydroxylase 1 | HMPREF9554_02035 | O32144 | Positive | 1782062 - 1784611 | 92417.4 |
| putative xanthine dehydrogenase accessory factor | HMPREF9554_02036 | O32147 | Positive | 1784939 - 1785883 | 34906.3 |
| molybdopterin binding domain protein | HMPREF9554_02037 | Not Available | Positive | 1785914 - 1786885 | 35522.5 |
| molybdenum cofactor biosynthesis protein c | HMPREF9554_02038 | B0TI15 | Positive | 1786882 - 1787358 | 17342.1 |
| radical sam domain protein | HMPREF9554_02039 | Q9WX96 | Positive | 1787435 - 1788307 | 33189.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
