Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9554_01969 | Not Available | Negative | 1714504 - 1714668 | 6406.69 |
| hypothetical protein | HMPREF9554_01970 | Not Available | Positive | 1714776 - 1715183 | 15218.6 |
| hypothetical protein | HMPREF9554_01972 | Not Available | Negative | 1715242 - 1715580 | 12675.4 |
| hypothetical protein | HMPREF9554_01971 | Not Available | Positive | 1715579 - 1715725 | 5530.36 |
| hypothetical protein | HMPREF9554_01973 | Not Available | Negative | 1715709 - 1717376 | 65445.1 |
| site-specific recombinase, phage integrase family | HMPREF9554_01975 | Not Available | Positive | 1719993 - 1721471 | 57237.7 |
| mate efflux family protein | HMPREF9554_01976 | P54181 | Negative | 1721967 - 1723316 | 48953.4 |
| hypothetical protein | HMPREF9554_01977 | Not Available | Negative | 1723939 - 1724067 | 4526.62 |
| hypothetical protein | HMPREF9554_01978 | Not Available | Positive | 1724258 - 1724431 | 6452.49 |
| atp-dependent dna helicase recq | HMPREF9554_01979 | O34748 | Positive | 1724419 - 1726707 | 86122.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
