Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase, alpha/beta domain protein | HMPREF9554_01928 | Not Available | Negative | 1683689 - 1684606 | 33301.8 |
| hypothetical protein | HMPREF9554_01929 | Not Available | Negative | 1684585 - 1684761 | 6581.18 |
| hypothetical protein | HMPREF9554_01930 | Not Available | Negative | 1684784 - 1684912 | 4900.19 |
| hypothetical protein | HMPREF9554_01931 | O83391 | Positive | 1684977 - 1685885 | 34551.3 |
| exodeoxyribonuclease vii, large subunit | HMPREF9554_01932 | B8I3A9 | Positive | 1686174 - 1687355 | 43513.2 |
| nitroreductase family protein | HMPREF9554_01933 | Not Available | Negative | 1687613 - 1688140 | 19700.0 |
| hypothetical protein | HMPREF9554_01934 | Not Available | Positive | 1688304 - 1688429 | 4966.31 |
| aminopeptidase i zinc metalloprotease (m18) | HMPREF9554_01935 | A0PYH7 | Negative | 1688457 - 1689737 | 46548.6 |
| hypothetical protein | HMPREF9554_01936 | Not Available | Negative | 1689780 - 1690547 | 27683.3 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | HMPREF9554_01937 | Q73JQ7 | Negative | 1691099 - 1692145 | 39607.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
