Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | HMPREF9554_01878 | P75835 | Negative | 1634799 - 1636232 | 53113.0 |
| hypothetical protein | HMPREF9554_01879 | Not Available | Positive | 1636331 - 1636462 | 5015.37 |
| Trna-his | Not Available | Not Available | Positive | 1636503 - 1636574 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1636619 - 1636692 | Not Available |
| hypothetical protein | HMPREF9554_01882 | Not Available | Positive | 1637259 - 1637429 | 6058.44 |
| hypothetical protein | HMPREF9554_01883 | Not Available | Positive | 1637449 - 1637577 | 4683.74 |
| endopeptidase clp | HMPREF9554_01884 | Q73JM9 | Positive | 1638026 - 1638619 | 21803.5 |
| oxidoreductase nad-binding domain protein | HMPREF9554_01885 | Q8U194 | Positive | 1638731 - 1639564 | 30074.8 |
| glutamate synthase (nadph), homotetrameric | HMPREF9554_01886 | Q8U195 | Positive | 1639610 - 1641112 | 54960.5 |
| leucine rich repeat protein | HMPREF9554_01887 | Not Available | Positive | 1641582 - 1642454 | 31224.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
