Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9554_01738 | Not Available | Negative | 1524938 - 1525126 | 6612.05 |
| hypothetical protein | HMPREF9554_01739 | Not Available | Negative | 1525250 - 1525426 | 6647.09 |
| dna gyrase, b subunit | HMPREF9554_01740 | O87545 | Positive | 1525571 - 1527487 | 71478.8 |
| hypothetical protein | HMPREF9554_01741 | Not Available | Positive | 1527548 - 1527718 | 6765.23 |
| putative flavodoxin | HMPREF9554_01742 | Not Available | Positive | 1527866 - 1528450 | 21577.1 |
| hypothetical protein | HMPREF9554_01743 | Not Available | Positive | 1528638 - 1528772 | 4941.0 |
| hypothetical protein | HMPREF9554_01744 | Not Available | Negative | 1528774 - 1528950 | 6867.45 |
| transcriptional regulator, padr family | HMPREF9554_01745 | Not Available | Positive | 1529080 - 1529415 | 12501.1 |
| hypothetical protein | HMPREF9554_01746 | Not Available | Positive | 1529431 - 1530186 | 28829.6 |
| hypothetical protein | HMPREF9554_01747 | Not Available | Positive | 1530202 - 1531512 | 48630.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
