Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9554_01498 | Not Available | Positive | 1336845 - 1337243 | 15426.5 |
| hypothetical protein | HMPREF9554_01499 | Not Available | Negative | 1337283 - 1337450 | 5969.12 |
| hypothetical protein | HMPREF9554_01500 | Not Available | Positive | 1337571 - 1337690 | 4816.73 |
| phenylalanine--trna ligase, beta subunit | HMPREF9554_01502 | O83059 | Negative | 1337969 - 1339714 | 65472.5 |
| hypothetical protein | HMPREF9554_01501 | Not Available | Positive | 1339692 - 1339826 | 5305.39 |
| hypothetical protein | HMPREF9554_01503 | Not Available | Negative | 1339988 - 1340150 | 6206.49 |
| hypothetical protein | HMPREF9554_01505 | Not Available | Negative | 1340225 - 1340413 | 7276.73 |
| d-ala d-ala ligase n-terminal domain protein | HMPREF9554_01504 | Q73JN2 | Positive | 1340401 - 1341507 | 40876.3 |
| hypothetical protein | HMPREF9554_01506 | Not Available | Positive | 1341639 - 1342598 | 35985.5 |
| hypothetical protein | HMPREF9554_01507 | Not Available | Negative | 1342617 - 1342771 | 5985.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
