Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine--trna ligase | HMPREF9554_01428 | Q73P19 | Positive | 1276199 - 1277620 | 53832.4 |
| hypothetical protein | HMPREF9554_01429 | Not Available | Positive | 1277711 - 1278103 | 14311.5 |
| hypothetical protein | HMPREF9554_01430 | Not Available | Negative | 1278439 - 1278681 | 8947.12 |
| abc transporter, atp-binding protein | HMPREF9554_01431 | P45073 | Negative | 1278665 - 1279537 | 32638.1 |
| osta-like protein | HMPREF9554_01432 | Not Available | Negative | 1279537 - 1280325 | 28967.5 |
| hypothetical protein | HMPREF9554_01433 | Not Available | Negative | 1280322 - 1280924 | 22860.9 |
| hypothetical protein | HMPREF9554_01434 | Not Available | Negative | 1281039 - 1281605 | 21050.4 |
| hypothetical protein | HMPREF9554_01435 | Not Available | Negative | 1281602 - 1282831 | 46540.3 |
| hypothetical protein | HMPREF9554_01436 | Not Available | Positive | 1283279 - 1283443 | 6042.44 |
| carbohydrate kinase, fggy family protein | HMPREF9554_01437 | Not Available | Negative | 1283511 - 1284746 | 45570.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
