Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | HMPREF9554_01408 | Not Available | Positive | 1255116 - 1255688 | 21771.7 |
| putative metallophosphoesterase | HMPREF9554_01409 | Not Available | Positive | 1255685 - 1256506 | 29894.1 |
| hypothetical protein | HMPREF9554_01410 | Not Available | Positive | 1256475 - 1256951 | 17043.2 |
| hypothetical protein | HMPREF9554_01411 | Not Available | Negative | 1256988 - 1257137 | 5841.76 |
| dna repair protein reco | HMPREF9554_01412 | Not Available | Negative | 1257282 - 1258043 | 28350.3 |
| ankyrin repeat protein | HMPREF9554_01413 | Not Available | Negative | 1258342 - 1261233 | 105239.0 |
| hypothetical protein | HMPREF9554_01414 | Not Available | Positive | 1261615 - 1261767 | 6020.48 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | HMPREF9554_01415 | Q73L91 | Positive | 1261841 - 1262953 | 40339.0 |
| cvpa family protein | HMPREF9554_01416 | O83534 | Positive | 1262950 - 1263429 | 17398.4 |
| dna polymerase iii domain protein | HMPREF9554_01417 | Not Available | Positive | 1263436 - 1264731 | 48584.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
