Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin gros | HMPREF9554_01238 | Q73P65 | Positive | 1115412 - 1115678 | 9420.51 |
| rhodanese-like protein | HMPREF9554_01239 | Not Available | Positive | 1115829 - 1116254 | 15721.2 |
| hypothetical protein | HMPREF9554_01241 | Not Available | Negative | 1116333 - 1116452 | 4586.91 |
| hypothetical protein | HMPREF9554_01240 | Not Available | Positive | 1116443 - 1116577 | 5004.21 |
| hypothetical protein | HMPREF9554_01242 | Not Available | Positive | 1116591 - 1116839 | 10049.2 |
| abc transporter, atp-binding protein | HMPREF9554_01243 | Q8RBQ1 | Positive | 1117068 - 1118597 | 56142.9 |
| branched-chain amino acid abc transporter, permease protein | HMPREF9554_01244 | P36948 | Positive | 1118614 - 1119618 | 35512.7 |
| sugar-binding domain protein | HMPREF9554_01245 | Not Available | Positive | 1119963 - 1120868 | 31652.4 |
| hypothetical protein | HMPREF9554_01246 | Not Available | Negative | 1121265 - 1121432 | 6286.64 |
| cys/met metabolism plp-dependent enzyme | HMPREF9554_01247 | Q9X0Z7 | Negative | 1121487 - 1122665 | 44208.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
