Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | F0421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
845641 bp
Thymine Count
847850 bp
Guanine Count
564459 bp
Cytosine Count
569947 bp
Genome Length
2827897 bp
Protein-coding Genes
3146 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d12 class n6 adenine-specific dna methyltransferase | HMPREF9554_01188 | Not Available | Positive | 1072560 - 1073678 | 42548.2 |
| hypothetical protein | HMPREF9554_01189 | Not Available | Positive | 1073752 - 1074270 | 19008.2 |
| hypothetical protein | HMPREF9554_01190 | Not Available | Positive | 1074380 - 1074568 | 7030.19 |
| phosphoglycerate kinase | HMPREF9554_01191 | P62421 | Positive | 1074561 - 1075820 | 45104.9 |
| hypothetical protein | HMPREF9554_01192 | Not Available | Positive | 1076010 - 1076174 | 6184.46 |
| triose-phosphate isomerase | HMPREF9554_01193 | Q73NB9 | Positive | 1076150 - 1077022 | 31848.7 |
| tetratricopeptide repeat protein | HMPREF9554_01194 | Not Available | Positive | 1077237 - 1079832 | 97866.5 |
| hypothetical protein | HMPREF9554_01195 | Not Available | Positive | 1079833 - 1079998 | 6171.4 |
| hypothetical protein | HMPREF9554_01196 | Not Available | Positive | 1080020 - 1080655 | 24982.3 |
| hypothetical protein | HMPREF9554_01197 | Not Available | Positive | 1080911 - 1081186 | 10663.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
