Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase expression/formation protein hype | HMPREF9530_05793 | P24193 | Positive | 5207853 - 5208863 | 35068.5 |
| formate hydrogenlyase transcriptional activator | HMPREF9530_05794 | P19323 | Positive | 5208952 - 5209293 | 12718.0 |
| sigma-54 interaction domain protein | HMPREF9530_05795 | Not Available | Positive | 5209293 - 5211005 | 64743.3 |
| tobe domain protein | HMPREF9530_05796 | Not Available | Positive | 5211035 - 5211478 | 14969.2 |
| hypothetical protein | HMPREF9530_05797 | P25728 | Negative | 5211517 - 5211861 | 13549.8 |
| hypothetical protein | HMPREF9530_05798 | Not Available | Positive | 5211918 - 5212151 | 8613.31 |
| dna mismatch repair protein muts | HMPREF9530_05799 | B1LQ55 | Positive | 5212148 - 5214709 | 95364.7 |
| serine/threonine-protein phosphatase 2 | HMPREF9530_05800 | P55799 | Positive | 5214815 - 5215471 | 25099.6 |
| transcriptional regulator, deor family | HMPREF9530_05801 | P52598 | Negative | 5215522 - 5216319 | 28534.6 |
| phosphogluconate dehydrogenase (decarboxylating), nad binding domain protein | HMPREF9530_05802 | Q46888 | Positive | 5216485 - 5217393 | 30676.9 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





