Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s binding domain protein | HMPREF9530_05783 | P16432 | Negative | 5198809 - 5199351 | 20328.4 |
| respiratory-chain nadh dehydrogenase, 30 kd subunit | HMPREF9530_05784 | P16431 | Negative | 5199361 - 5201091 | 65759.1 |
| nadh dehydrogenase | HMPREF9530_05785 | P16430 | Negative | 5201088 - 5202011 | 33045.4 |
| formate hydrogenlyase subunit 3 | HMPREF9530_05786 | P16429 | Negative | 5202014 - 5203840 | 64155.3 |
| 4fe-4s binding domain protein | HMPREF9530_05787 | P0AAK2 | Negative | 5203837 - 5204448 | 21823.3 |
| formate hydrogenlyase regulatory protein hyca | HMPREF9530_05788 | P0AEV5 | Negative | 5204573 - 5205034 | 17627.9 |
| hydrogenase nickel insertion protein hypa | HMPREF9530_05789 | P0A701 | Positive | 5205234 - 5205596 | 13529.3 |
| hydrogenase accessory protein hypb | HMPREF9530_05790 | P0AAN4 | Positive | 5205711 - 5206472 | 27618.3 |
| hydrogenase assembly chaperone hypc/hupf | HMPREF9530_05791 | P0AAM5 | Positive | 5206463 - 5206735 | 9732.58 |
| hydrogenase expression/formation protein hypd | HMPREF9530_05792 | P24192 | Positive | 5206735 - 5207856 | 41366.7 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





