Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| csid | HMPREF9530_05712 | B7NSE0 | Positive | 5141472 - 5142449 | 37397.6 |
| fad dependent oxidoreductase | HMPREF9530_05713 | B7N6P4 | Positive | 5142469 - 5143737 | 46127.7 |
| succinate-semialdehyde dehydrogenase | HMPREF9530_05714 | P25526 | Positive | 5143760 - 5145208 | 51768.1 |
| 4-aminobutyrate transaminase | HMPREF9530_05715 | P22256 | Positive | 5145222 - 5146502 | 45606.3 |
| gaba permease | HMPREF9530_05716 | P25527 | Positive | 5146739 - 5148139 | 51113.1 |
| fcd domain protein | HMPREF9530_05717 | P37338 | Positive | 5148142 - 5148822 | 25771.3 |
| lysm domain protein | HMPREF9530_05718 | P0ADE7 | Negative | 5148823 - 5149272 | 16094.0 |
| hypothetical protein | HMPREF9530_05719 | P0AE44 | Negative | 5149356 - 5149514 | 5865.57 |
| transcriptional regulator, arsr family | HMPREF9530_05720 | P77295 | Positive | 5149697 - 5149996 | 10596.9 |
| hypothetical protein | HMPREF9530_05721 | P55734 | Positive | 5150006 - 5150530 | 18699.0 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





