Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | HMPREF9530_05341 | Q8FAT5 | Negative | 4807444 - 4808961 | 57858.0 |
| amino acid/peptide transporter | HMPREF9530_05342 | P39276 | Negative | 4809198 - 4810655 | 53001.8 |
| lysine decarboxylase, inducible | HMPREF9530_05343 | P0A9H4 | Negative | 4810714 - 4812900 | 82760.5 |
| transporter, basic amino acid/polyamine antiporter (apa) family | HMPREF9530_05344 | P0AAF0 | Negative | 4812941 - 4814275 | 46667.8 |
| transcriptional regulatory protein, c-terminal domain protein | HMPREF9530_05345 | P23890 | Negative | 4814641 - 4816179 | 57832.2 |
| hypothetical protein | HMPREF9530_05346 | Not Available | Positive | 4816466 - 4816684 | 8098.82 |
| arylsulfatase | HMPREF9530_05347 | P75785 | Positive | 4816725 - 4817738 | 37273.1 |
| hypothetical protein | HMPREF9530_05348 | Not Available | Negative | 4817725 - 4817943 | 7822.72 |
| tetratricopeptide repeat protein | HMPREF9530_05349 | Not Available | Negative | 4818098 - 4819171 | 41412.3 |
| site-specific recombinase, phage integrase family | HMPREF9530_05350 | Not Available | Negative | 4819397 - 4820662 | 48007.1 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





