Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter, permease protein | HMPREF9530_04956 | P77315 | Positive | 4432291 - 4433284 | 34360.5 |
| groes-like protein | HMPREF9530_04957 | P77360 | Positive | 4433285 - 4434410 | 40091.5 |
| aldose 1-epimerase | HMPREF9530_04958 | P76584 | Positive | 4434422 - 4435294 | 32661.2 |
| doxx family protein | HMPREF9530_04959 | P0AD47 | Negative | 4435342 - 4435764 | 15242.4 |
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--nad(+) reductase component | HMPREF9530_04960 | B1LNJ8 | Negative | 4435861 - 4437063 | 43773.2 |
| 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | HMPREF9530_04961 | A7ZPY4 | Negative | 4437073 - 4437885 | 28515.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | HMPREF9530_04962 | A7ZPY3 | Negative | 4437882 - 4438202 | 11329.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | HMPREF9530_04963 | B7NRI8 | Negative | 4438202 - 4438720 | 20593.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha | HMPREF9530_04964 | P0ABR6 | Negative | 4438717 - 4440078 | 51096.8 |
| hca operon transcriptional activator | HMPREF9530_04965 | Q47141 | Positive | 4440121 - 4441104 | 36539.9 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





