Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter, atp-binding protein | HMPREF9530_04684 | P31134 | Positive | 4183815 - 4184991 | 43419.9 |
| cyclic diguanylate phosphodiesterase (eal) domain protein | HMPREF9530_04685 | P21514 | Negative | 4185089 - 4186177 | 40798.4 |
| hypothetical protein | HMPREF9530_04686 | Not Available | Positive | 4186498 - 4186686 | 7143.55 |
| transporter, betaine/carnitine/choline family | HMPREF9530_04687 | P0ABD0 | Negative | 4187066 - 4189099 | 75854.5 |
| transcriptional repressor beti | HMPREF9530_04688 | B1LIJ9 | Positive | 4189210 - 4189815 | 22373.1 |
| betaine-aldehyde dehydrogenase | HMPREF9530_04689 | B7L441 | Positive | 4189838 - 4191301 | 52569.6 |
| choline dehydrogenase | HMPREF9530_04690 | B1LIJ7 | Positive | 4191315 - 4193003 | 62446.9 |
| protoporphyrinogen oxidase | HMPREF9530_04691 | P0ACB6 | Negative | 4193197 - 4193742 | 21200.4 |
| potassium uptake protein, trkh family | HMPREF9530_04692 | P0AFZ8 | Negative | 4193754 - 4195205 | 52962.9 |
| yigz family protein | HMPREF9530_04693 | Not Available | Negative | 4195244 - 4195721 | 16629.9 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





