Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core biosynthesis protein rfay | HMPREF9530_04046 | Q9ZIS7 | Negative | 3618633 - 3619325 | 26996.8 |
| glycosyltransferase, family 8 | HMPREF9530_04047 | P19817 | Negative | 3619335 - 3620330 | 38492.9 |
| glycosyltransferase, family 8 | HMPREF9530_04048 | P19816 | Negative | 3620347 - 3621363 | 38853.9 |
| lipopolysaccharide kinase (kdo/waap) family protein | HMPREF9530_04049 | Q9R9D6 | Negative | 3621379 - 3622176 | 31133.2 |
| glycosyltransferase, group 1 family protein | HMPREF9530_04050 | P25740 | Negative | 3622169 - 3623293 | 42586.7 |
| putative lipopolysaccharide heptosyltransferase iii | HMPREF9530_04051 | Q9R9D5 | Negative | 3623290 - 3624312 | 37936.8 |
| 3-deoxy-d-manno-octulosonic-acid transferase | HMPREF9530_04052 | P0AC77 | Positive | 3624761 - 3626032 | 47175.8 |
| pantetheine-phosphate adenylyltransferase | HMPREF9530_04053 | A7ZTI5 | Positive | 3626040 - 3626519 | 17837.7 |
| dna-formamidopyrimidine glycosylase | HMPREF9530_04054 | C4ZXM7 | Negative | 3626558 - 3627367 | 30317.8 |
| ribosomal protein l33 | HMPREF9530_04055 | A8ARM4 | Negative | 3627465 - 3627632 | 6371.94 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





