Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial type ii secretion system domain protein f | HMPREF9530_03369 | P36646 | Negative | 2989301 - 2990503 | 44255.0 |
| type ii/iv secretion system protein | HMPREF9530_03370 | P36645 | Negative | 2990493 - 2991878 | 50683.5 |
| prepilin-type cleavage/methylation n-terminal domain protein | HMPREF9530_03371 | P36647 | Negative | 2991888 - 2992328 | 15621.7 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | HMPREF9530_03372 | P30011 | Negative | 2992531 - 2993466 | 34411.0 |
| n-acetylmuramoyl-l-alanine amidase | HMPREF9530_03373 | P13016 | Positive | 2993512 - 2994063 | 20520.1 |
| protein ampe | HMPREF9530_03374 | P0AE14 | Positive | 2994060 - 2994914 | 32162.9 |
| aromatic amino acid transport protein arop | HMPREF9530_03375 | P15993 | Negative | 2994962 - 2996335 | 49739.2 |
| type vi secretion system effector, hcp1 family | HMPREF9530_03376 | Not Available | Positive | 2996862 - 2998652 | 65919.4 |
| colicin immunity protein / pyocin immunity protein | HMPREF9530_03377 | Q03708 | Positive | 2998645 - 2998929 | 11030.1 |
| hypothetical protein | HMPREF9530_03378 | Not Available | Positive | 2999097 - 2999285 | 7038.31 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





