Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter, atp-binding protein | HMPREF9530_03328 | Q3Z5U5 | Negative | 2947334 - 2948032 | 24980.7 |
| thiamine/thiamine pyrophosphate abc transporter, permease protein | HMPREF9530_03329 | P31549 | Negative | 2948016 - 2949626 | 59445.6 |
| thiamine/thiamine pyrophosphate abc transporter, thiamine/thiamine pyrophospate-binding protein | HMPREF9530_03330 | P31550 | Negative | 2949602 - 2950585 | 36195.2 |
| hypothetical protein | HMPREF9530_03331 | Not Available | Positive | 2950956 - 2951525 | 21745.7 |
| abc transporter, substrate-binding protein, family 5 | HMPREF9530_03332 | A1A7B8 | Negative | 2951755 - 2953413 | 64186.0 |
| 3-isopropylmalate dehydratase, small subunit | HMPREF9530_03334 | B7MAJ6 | Negative | 2953741 - 2954346 | 22604.8 |
| 3-isopropylmalate dehydratase, large subunit | HMPREF9530_03335 | B7MAJ7 | Negative | 2954357 - 2955757 | 49884.7 |
| 3-isopropylmalate dehydrogenase | HMPREF9530_03336 | Q1RGC4 | Negative | 2955760 - 2956851 | 39503.2 |
| 2-isopropylmalate synthase | HMPREF9530_03337 | B1LG11 | Negative | 2956851 - 2958483 | 59544.9 |
| hypothetical protein | HMPREF9530_03338 | Not Available | Positive | 2958662 - 2958823 | 5990.29 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





