Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit d | HMPREF9530_01837 | A7ZPA0 | Negative | 1605649 - 1607451 | 68728.5 |
| nadh dehydrogenase i subunit b | HMPREF9530_01838 | A7ZPA1 | Negative | 1607545 - 1608207 | 25057.3 |
| nadh dehydrogenase i subunit a | HMPREF9530_01840 | A7ZPA2 | Negative | 1608223 - 1608666 | 16458.2 |
| hypothetical protein | HMPREF9530_01839 | Not Available | Positive | 1608638 - 1608769 | 4650.57 |
| hypothetical protein | HMPREF9530_01841 | Not Available | Positive | 1608929 - 1609093 | 6476.09 |
| lysr substrate binding domain protein | HMPREF9530_01842 | P36771 | Negative | 1609296 - 1610234 | 34611.8 |
| hypothetical protein | HMPREF9530_01843 | Not Available | Positive | 1610474 - 1610728 | 9614.92 |
| aminotransferase alat | HMPREF9530_01844 | P0A960 | Positive | 1611154 - 1612371 | 45519.9 |
| hd domain protein | HMPREF9530_01845 | B7LBE5 | Positive | 1612455 - 1613054 | 22695.3 |
| trka c-terminal domain protein | HMPREF9530_01846 | P0AFU3 | Negative | 1613113 - 1614945 | 65924.0 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





