Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate binding domain protein | HMPREF9530_01726 | P37641 | Negative | 1488699 - 1489670 | 36130.1 |
| transcriptional regulator, luxr family | HMPREF9530_01727 | P37640 | Positive | 1490118 - 1490720 | 22575.5 |
| alpha,alpha-trehalase | HMPREF9530_01728 | P62602 | Negative | 1490771 - 1492420 | 63720.0 |
| hypothetical protein | HMPREF9530_01729 | Not Available | Negative | 1492525 - 1492644 | 4522.32 |
| di-heme cytochrome c peroxidase | HMPREF9530_01730 | P37197 | Positive | 1492825 - 1494222 | 51529.2 |
| glutamate decarboxylase | HMPREF9530_01731 | P58228 | Positive | 1494403 - 1494707 | 11989.1 |
| cytochrome c-type biogenesis protein ccmh | HMPREF9530_01732 | P0ABM9 | Negative | 1494708 - 1495617 | 33766.8 |
| thiol:disulfide interchange protein dsbe | HMPREF9530_01733 | P0AA87 | Negative | 1495614 - 1496171 | 20840.2 |
| cytochrome c-type biogenesis protein ccmf | HMPREF9530_01734 | P33927 | Negative | 1496168 - 1498111 | 71420.6 |
| cytochrome c-type biogenesis protein ccme | HMPREF9530_01735 | B1LKU3 | Negative | 1498108 - 1498587 | 17700.3 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





