Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS 21-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312869 bp
Thymine Count
1307888 bp
Guanine Count
1332865 bp
Cytosine Count
1329301 bp
Genome Length
5282923 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase, sulfur acceptor subunit csde | HMPREF9530_01291 | P0AGF3 | Negative | 1074811 - 1075254 | 15939.2 |
| cysteine desulfurase, catalytic subunit csda | HMPREF9530_01292 | Q46925 | Negative | 1075254 - 1076459 | 43267.6 |
| hypothetical protein | HMPREF9530_01293 | P65293 | Positive | 1076648 - 1076878 | 8305.88 |
| glycine cleavage system transcriptional activator | HMPREF9530_01295 | Not Available | Positive | 1077229 - 1078146 | 34403.4 |
| hypothetical protein | HMPREF9530_01296 | P0ADR4 | Positive | 1078165 - 1078560 | 14334.0 |
| putative rna 2'-o-ribose methyltransferase ygde | HMPREF9530_01297 | A7ZQQ1 | Positive | 1078553 - 1079653 | 41920.5 |
| transcriptional regulator, deor family | HMPREF9530_01298 | P0ACK8 | Negative | 1079697 - 1080428 | 27363.7 |
| l-fucose mutarotase | HMPREF9530_01299 | A7ZQP8 | Negative | 1080486 - 1080908 | 15474.0 |
| l-fuculokinase | HMPREF9530_01300 | P11553 | Negative | 1080910 - 1082358 | 53226.9 |
| arabinose isomerase | HMPREF9530_01301 | B7NVV0 | Negative | 1082437 - 1084212 | 64980.3 |
Pathways
12692 pathways
Health Effects
No health effects information available for this bacterium.





