Nitratifractor salsuginis DSM 16511

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Sulfurovaceae

Genus

Nitratifractor

Description

Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) is a strictly chemolithoautotrophic, denitrifying Gram-negative bacterium isolated from deep-sea hydrothermal vent chimney structures at the Iheya North hydrothermal field in the Mid-Okinawa Trough, Japan. Cells have a mean length of 2.5 mm and a width of approximately 0.6 mm. N. salsuginis grows by respiratory nitrate reduction with H2 as electron donor and nitrate as electron acceptor, forming N2 as a metabolic product. Oxygen, at low concentrations, could serve as an alternative electron acceptor for growth. Growth is observed at temperatures between 28 and 40 degrees Celsius with an optimum at 37.6 degrees Celsius, and at pH values between 5.6 and 7.6, with an optimum at pH 7.0. It is able to grow in the presence of between 1.5 and 3.5% (w/v) NaCl, with an optimum at 3.0. (Adapted from PMID: 15774687). (HAMAP: NITSE)

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilySulfurovaceae
GenusNitratifractor
SpeciesNitratifractor salsuginis
StrainDSM 16511

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Nitratifractor salsuginis DSM 16511
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemolithoautotroph
PathogenicityNo

Genome Summary

Nitratifractor salsuginis DSM 16511, complete sequence.

Gene Summary

Adenine Count

486587 bp

Thymine Count

481855 bp

Guanine Count

568032 bp

Cytosine Count

564811 bp

Genome Length

2101285 bp

Protein-coding Genes

2080 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobalt transporter cbimNITSA_RS00420Not AvailablePositive88440 - 8908423202.8
pdgle domain-containing proteinNITSA_RS00425Not AvailablePositive89081 - 8939211439.2
hypothetical proteinNITSA_RS00430Not AvailablePositive89379 - 8992421137.3
energy-coupling factor abc transporter atp-binding proteinNITSA_RS00435Not AvailablePositive89929 - 9066627729.6
hydrogenase nickel incorporation protein hypbNITSA_RS00440Not AvailablePositive90704 - 9147429011.6
hypc/hybg/hupf family hydrogenase formation chaperoneNITSA_RS00445Not AvailablePositive91487 - 9177710547.7
hydrogenase formation protein hypdNITSA_RS00450Not AvailablePositive91774 - 9293443617.9
hydrogenase expression/formation protein hypeNITSA_RS00455Not AvailablePositive92931 - 9393235945.2
hydrogenase maturation proteinNITSA_RS00460Not AvailablePositive93935 - 9562063888.2
hydrogenase maturation nickel metallochaperone hypaNITSA_RS00465Not AvailablePositive95602 - 9594312618.2

Displaying genes 181 – 190 of 2184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.