Nitratifractor salsuginis DSM 16511

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Sulfurovaceae

Genus

Nitratifractor

Description

Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) is a strictly chemolithoautotrophic, denitrifying Gram-negative bacterium isolated from deep-sea hydrothermal vent chimney structures at the Iheya North hydrothermal field in the Mid-Okinawa Trough, Japan. Cells have a mean length of 2.5 mm and a width of approximately 0.6 mm. N. salsuginis grows by respiratory nitrate reduction with H2 as electron donor and nitrate as electron acceptor, forming N2 as a metabolic product. Oxygen, at low concentrations, could serve as an alternative electron acceptor for growth. Growth is observed at temperatures between 28 and 40 degrees Celsius with an optimum at 37.6 degrees Celsius, and at pH values between 5.6 and 7.6, with an optimum at pH 7.0. It is able to grow in the presence of between 1.5 and 3.5% (w/v) NaCl, with an optimum at 3.0. (Adapted from PMID: 15774687). (HAMAP: NITSE)

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilySulfurovaceae
GenusNitratifractor
SpeciesNitratifractor salsuginis
StrainDSM 16511

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Nitratifractor salsuginis DSM 16511
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemolithoautotroph
PathogenicityNo

Genome Summary

Nitratifractor salsuginis DSM 16511, complete sequence.

Gene Summary

Adenine Count

486587 bp

Thymine Count

481855 bp

Guanine Count

568032 bp

Cytosine Count

564811 bp

Genome Length

2101285 bp

Protein-coding Genes

2080 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exodeoxyribonuclease vii large subunitNITSA_RS08585Not AvailableNegative1691529 - 169279448006.9
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieNITSA_RS08590Not AvailableNegative1692998 - 169371727044.8
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdNITSA_RS08595Not AvailableNegative1693710 - 169472037616.0
duf72 domain-containing proteinNITSA_RS08600Not AvailableNegative1694878 - 169561829191.5
ybhb/ybcl family raf kinase inhibitor-like proteinNITSA_RS08605Not AvailableNegative1695623 - 169614118953.3
dmt family transporterNITSA_RS08610Not AvailablePositive1696218 - 169710232612.1
fumarylacetoacetate hydrolase family proteinNITSA_RS08615Not AvailablePositive1697200 - 169780822990.7
ncs2 family permeaseNITSA_RS08620Not AvailablePositive1697907 - 169920545870.8
phosphoribosyltransferaseNITSA_RS08625Not AvailablePositive1699219 - 169966517251.8
amino acid abc transporter substrate-binding proteinNITSA_RS08630Not AvailablePositive1699800 - 170081636814.2

Displaying genes 1811 – 1820 of 2184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.