Nitratifractor salsuginis DSM 16511

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Sulfurovaceae

Genus

Nitratifractor

Description

Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) is a strictly chemolithoautotrophic, denitrifying Gram-negative bacterium isolated from deep-sea hydrothermal vent chimney structures at the Iheya North hydrothermal field in the Mid-Okinawa Trough, Japan. Cells have a mean length of 2.5 mm and a width of approximately 0.6 mm. N. salsuginis grows by respiratory nitrate reduction with H2 as electron donor and nitrate as electron acceptor, forming N2 as a metabolic product. Oxygen, at low concentrations, could serve as an alternative electron acceptor for growth. Growth is observed at temperatures between 28 and 40 degrees Celsius with an optimum at 37.6 degrees Celsius, and at pH values between 5.6 and 7.6, with an optimum at pH 7.0. It is able to grow in the presence of between 1.5 and 3.5% (w/v) NaCl, with an optimum at 3.0. (Adapted from PMID: 15774687). (HAMAP: NITSE)

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilySulfurovaceae
GenusNitratifractor
SpeciesNitratifractor salsuginis
StrainDSM 16511

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Nitratifractor salsuginis DSM 16511
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemolithoautotroph
PathogenicityNo

Genome Summary

Nitratifractor salsuginis DSM 16511, complete sequence.

Gene Summary

Adenine Count

486587 bp

Thymine Count

481855 bp

Guanine Count

568032 bp

Cytosine Count

564811 bp

Genome Length

2101285 bp

Protein-coding Genes

2080 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sixa phosphatase family proteinNITSA_RS05675Not AvailablePositive1126939 - 112744218693.0
duf2059 domain-containing proteinNITSA_RS10875Not AvailableNegative1127450 - 112798019897.7
l,d-transpeptidaseNITSA_RS05685Not AvailableNegative1128016 - 112874727508.6
c-type cytochromeNITSA_RS05690Not AvailableNegative1128744 - 112911213779.5
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase foldNITSA_RS05695Not AvailablePositive1129213 - 113006430467.5
signal peptidase iNITSA_RS05700Not AvailablePositive1130061 - 113102337409.4
site-2 protease family proteinNITSA_RS05705Not AvailablePositive1131023 - 113167323706.0
ribose 5-phosphate isomerase bNITSA_RS05710Not AvailablePositive1131778 - 113223016598.7
cupin domain-containing proteinNITSA_RS05715Not AvailablePositive1132237 - 113252710886.8
valine--trna ligaseNITSA_RS05720Not AvailablePositive1132698 - 1135331101308.0

Displaying genes 1251 – 1260 of 2184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.